Sam_g18518

Description : non-core component *(NDUFS4/18kDa) of NADH dehydrogenase complex & original description: none

Gene families : OG0003754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003754_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g18518
Cluster	HCCA: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0365.g066954	FRO1	non-core component *(NDUFS4/18kDa) of NADH dehydrogenase...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001229.17	No alias	Cellular respiration.oxidative phosphorylation.NADH...	0.02	OrthoFinder output from all 47 species
Mp8g15660.1	FRO1	non-core component NduFS4 of NADH dehydrogenase	0.03	OrthoFinder output from all 47 species
Sam_g47058	No alias	non-core component *(NDUFS4/18kDa) of NADH dehydrogenase...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005747	mitochondrial respiratory chain complex I	IEA	Interproscan
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022900	electron transport chain	IEA	Interproscan
CC	GO:0030964	NADH dehydrogenase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0045271	respiratory chain complex I	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006885	NADH_UbQ_FeS_4_mit-like	70	163

External Links

No external refs found!