Coexpression cluster: Cluster_80 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 25.52% (37/145) 1.02 1.7e-05 0.005779
GO:0003674 molecular_function 37.24% (54/145) 0.74 3.4e-05 0.005926
GO:0003723 RNA binding 6.9% (10/145) 2.21 7.1e-05 0.008161
GO:0032991 protein-containing complex 6.9% (10/145) 2.1 0.000126 0.010873
GO:1901363 heterocyclic compound binding 15.86% (23/145) 1.15 0.00026 0.012777
GO:0097159 organic cyclic compound binding 15.86% (23/145) 1.15 0.00026 0.012777
GO:0098796 membrane protein complex 4.14% (6/145) 2.71 0.000339 0.014583
GO:0003676 nucleic acid binding 9.66% (14/145) 1.61 0.000224 0.015378
GO:0034765 regulation of monoatomic ion transmembrane transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:1904062 regulation of monoatomic cation transmembrane transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:2001259 positive regulation of cation channel activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:0034767 positive regulation of monoatomic ion transmembrane transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:0043266 regulation of potassium ion transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:2001257 regulation of cation channel activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:0043270 positive regulation of monoatomic ion transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:0050804 modulation of chemical synaptic transmission 1.38% (2/145) 5.06 0.001646 0.016657
GO:0051050 positive regulation of transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:1904064 positive regulation of cation transmembrane transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:1901379 regulation of potassium ion transmembrane transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:1901016 regulation of potassium ion transmembrane transporter activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:1901018 positive regulation of potassium ion transmembrane transporter activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:1901381 positive regulation of potassium ion transmembrane transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:1903818 positive regulation of voltage-gated potassium channel activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:0099177 regulation of trans-synaptic signaling 1.38% (2/145) 5.06 0.001646 0.016657
GO:0032409 regulation of transporter activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:0032222 regulation of synaptic transmission, cholinergic 1.38% (2/145) 5.06 0.001646 0.016657
GO:0032411 positive regulation of transporter activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:0022898 regulation of transmembrane transporter activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:0032412 regulation of monoatomic ion transmembrane transporter activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:0030431 sleep 1.38% (2/145) 5.06 0.001646 0.016657
GO:0032414 positive regulation of ion transmembrane transporter activity 1.38% (2/145) 5.06 0.001646 0.016657
GO:0043268 positive regulation of potassium ion transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:0034762 regulation of transmembrane transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:0034764 positive regulation of transmembrane transport 1.38% (2/145) 5.06 0.001646 0.016657
GO:0043269 regulation of monoatomic ion transport 1.38% (2/145) 4.93 0.00196 0.017288
GO:0032879 regulation of localization 1.38% (2/145) 4.93 0.00196 0.017288
GO:0051049 regulation of transport 1.38% (2/145) 4.93 0.00196 0.017288
GO:0010959 regulation of metal ion transport 1.38% (2/145) 4.93 0.00196 0.017288
GO:0030120 vesicle coat 1.38% (2/145) 4.99 0.0018 0.01769
GO:0044093 positive regulation of molecular function 1.38% (2/145) 4.87 0.002127 0.018289
GO:0008537 proteasome activator complex 0.69% (1/145) 8.52 0.002727 0.022882
GO:0098800 inner mitochondrial membrane protein complex 2.07% (3/145) 3.42 0.002879 0.02303
GO:0048523 negative regulation of cellular process 1.38% (2/145) 4.66 0.002858 0.023405
GO:0032501 multicellular organismal process 1.38% (2/145) 4.61 0.003056 0.023894
GO:0010646 regulation of cell communication 1.38% (2/145) 4.47 0.00369 0.026444
GO:0030117 membrane coat 1.38% (2/145) 4.47 0.00369 0.026444
GO:0023051 regulation of signaling 1.38% (2/145) 4.47 0.00369 0.026444
GO:0098798 mitochondrial protein-containing complex 2.07% (3/145) 3.32 0.003465 0.026486
GO:0006359 regulation of transcription by RNA polymerase III 0.69% (1/145) 7.52 0.005447 0.030718
GO:0016480 negative regulation of transcription by RNA polymerase III 0.69% (1/145) 7.52 0.005447 0.030718
GO:0042995 cell projection 0.69% (1/145) 7.52 0.005447 0.030718
GO:0007005 mitochondrion organization 0.69% (1/145) 7.52 0.005447 0.030718
GO:0007006 mitochondrial membrane organization 0.69% (1/145) 7.52 0.005447 0.030718
GO:0007007 inner mitochondrial membrane organization 0.69% (1/145) 7.52 0.005447 0.030718
GO:0042407 cristae formation 0.69% (1/145) 7.52 0.005447 0.030718
GO:0120025 plasma membrane bounded cell projection 0.69% (1/145) 7.52 0.005447 0.030718
GO:0048870 cell motility 0.69% (1/145) 7.52 0.005447 0.030718
GO:0031514 motile cilium 0.69% (1/145) 7.52 0.005447 0.030718
GO:0005929 cilium 0.69% (1/145) 7.52 0.005447 0.030718
GO:0005509 calcium ion binding 3.45% (5/145) 2.24 0.004416 0.031
GO:0048519 negative regulation of biological process 1.38% (2/145) 4.2 0.005383 0.037037
GO:0043069 negative regulation of programmed cell death 0.69% (1/145) 6.93 0.00816 0.039534
GO:0061617 MICOS complex 0.69% (1/145) 6.93 0.00816 0.039534
GO:0043066 negative regulation of apoptotic process 0.69% (1/145) 6.93 0.00816 0.039534
GO:0060548 negative regulation of cell death 0.69% (1/145) 6.93 0.00816 0.039534
GO:0061650 ubiquitin-like protein conjugating enzyme activity 0.69% (1/145) 6.93 0.00816 0.039534
GO:1903507 negative regulation of nucleic acid-templated transcription 0.69% (1/145) 6.93 0.00816 0.039534
GO:0061657 UFM1 conjugating enzyme activity 0.69% (1/145) 6.93 0.00816 0.039534
GO:1902679 negative regulation of RNA biosynthetic process 0.69% (1/145) 6.93 0.00816 0.039534
GO:0051253 negative regulation of RNA metabolic process 0.69% (1/145) 6.93 0.00816 0.039534
GO:0045892 negative regulation of DNA-templated transcription 0.69% (1/145) 6.93 0.00816 0.039534
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity 0.69% (1/145) 6.52 0.010865 0.047917
GO:0030126 COPI vesicle coat 0.69% (1/145) 6.52 0.010865 0.047917
GO:0071568 UFM1 transferase activity 0.69% (1/145) 6.52 0.010865 0.047917
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 0.69% (1/145) 6.52 0.010865 0.047917
GO:0004853 uroporphyrinogen decarboxylase activity 0.69% (1/145) 6.52 0.010865 0.047917
GO:0046907 intracellular transport 2.07% (3/145) 2.69 0.011474 0.049337
GO:0051649 establishment of localization in cell 2.07% (3/145) 2.69 0.011474 0.049337
GO:0048522 positive regulation of cellular process 1.38% (2/145) 3.71 0.01033 0.049357
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_5 0.036 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_90 0.03 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_156 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_187 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_171 0.023 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_127 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_6 0.021 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_19 0.024 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_48 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_198 0.015 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_198 0.022 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_66 0.015 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_126 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_41 0.018 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_66 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_16 0.017 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_47 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_25 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_9 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_160 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_80 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_81 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_213 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_68 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_111 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_140 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_164 0.022 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_8 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_62 0.033 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_74 0.037 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_81 0.043 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_86 0.027 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_88 0.041 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_110 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_167 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_175 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_118 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_17 0.015 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_119 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_145 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_13 0.016 OrthoFinder output from all 47 species Compare
Sequences (145) (download table)

InterPro Domains

GO Terms

Family Terms