Sam_g18487

Description : not classified & original description: none

Gene families : OG0015667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015667_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g18487
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
Aop_g42290	No alias	not classified & original description: none	0.25	OrthoFinder output from all 47 species
Aop_g53101	No alias	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Aop_g62767	No alias	not classified & original description: none	0.15	OrthoFinder output from all 47 species
Dcu_g51537	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Sam_g45052	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000270	peptidoglycan metabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006027	glycosaminoglycan catabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008745	N-acetylmuramoyl-L-alanine amidase activity	IEA	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009253	peptidoglycan catabolic process	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	None	Extended
BP	GO:0030203	glycosaminoglycan metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0061783	peptidoglycan muralytic activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004181	metallocarboxypeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008235	metalloexopeptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002502	Amidase_domain	133	254

External Links

No external refs found!