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  5. Sam_g18379

Sam_g18379


Description : not classified & original description: none


Gene families : OG0000885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000885_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18379

Target Alias Description ECC score Gene Family Method Actions
AT2G01070 No alias Lung seven transmembrane receptor family protein 0.03 OrthoFinder output from all 47 species
Adi_g059109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46759 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g52697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05203 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g03200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53386.t1 Aspi01Gene53386 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g036892 No alias not classified & original description: CDS=359-1963 0.04 OrthoFinder output from all 47 species
Dac_g03307 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08158 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016725001 No alias No description available 0.05 OrthoFinder output from all 47 species
Len_g09106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55815 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g01227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo267335 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g12274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26628 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034263_P001 Zm00001e034263 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004615 phosphomannomutase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009637 GPR107/GPR108-like 156 442
No external refs found!