Sam_g18317

Description : beta-type-3 component *(PBC) of 26S proteasome & original description: none

Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g18317

Target	Alias	Description	ECC score	Gene Family Method
Adi_g018669	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Adi_g039491	PBC1	beta-type-3 component *(PBC) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Zm00001e030465_P001	PBC1, Zm00001e030465	component beta type-3 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Zm00001e037487_P001	PBC1, Zm00001e037487	component beta type-3 of 26S proteasome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
CC	GO:0005787	signal peptidase complex	IEP	HCCA
BP	GO:0006465	signal peptide processing	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	7	189

External Links

No external refs found!