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  5. Sam_g18169

Sam_g18169


Description : aldehyde decarbonylase component *(CER1) of CER1-CER3 alkane-forming complex & original description: none


Gene families : OG0000470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18169
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Als_g01038 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Als_g04361 CER1 aldehyde-generating component *(CER3) of CER1-CER3... 0.06 OrthoFinder output from all 47 species
Aop_g18595 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Aop_g28968 CER1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08995 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g69612 CER3, WAX2, YRE, FLP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12451 CER1 aldehyde-generating component *(CER3) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
GSVIVT01018419001 CER1 Protein ECERIFERUM 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_11787 CER1 aldehyde decarbonylase component CER1 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
LOC_Os10g33250.1 CER1, LOC_Os10g33250 aldehyde decarbonylase component CER1 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Lfl_g16118 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Lfl_g39301 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
MA_1050556g0010 CER3, WAX2, YRE, FLP1 no description available(sp|q69pa8|glo11_orysj : 214.0) 0.02 OrthoFinder output from all 47 species
Mp1g14030.1 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Nbi_g09407 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Nbi_g25577 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Ppi_g12038 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000122 CER1 not classified & original description: CDS=23-1897 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007784 CER1 not classified & original description: CDS=132-1955 0.03 OrthoFinder output from all 47 species
Smo437448 CER3, WAX2, YRE, FLP1 Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
Spa_g48494 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Tin_g08156 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR021940 CER1-like_C 453 623
IPR006694 Fatty_acid_hydroxylase 142 277
No external refs found!