Sam_g18146

Description : not classified & original description: none

Gene families : OG0006792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006792_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g18146

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00233660	evm_27.TU.AmTr_v1...	GTP-binding protein At3g49725, chloroplastic...	0.03	OrthoFinder output from all 47 species
Aev_g03313	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g10418	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021135.19	No alias	GTP-binding protein At3g49725, chloroplastic...	0.02	OrthoFinder output from all 47 species
MA_10437248g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp8g01100.1	No alias	GTP-binding protein At3g49725, chloroplastic...	0.02	OrthoFinder output from all 47 species
Ore_g19828	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g48993	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g07834	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140299	small molecule sensor activity	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR045498	HflX_C	453	524
IPR006073	GTP-bd	320	438
IPR025121	GTPase_HflX_N	144	232
IPR032305	GTP-bd_M	235	312

External Links

No external refs found!