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  5. Sam_g18013

Sam_g18013


Description : C2-class (Phytocalpain) calcium-activated protease & original description: none


Gene families : OG0002821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18013

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00125370 EMB80, EMB1275,... Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
Ala_g07685 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.03 OrthoFinder output from all 47 species
Als_g47927 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene04369.t1 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037769 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.02 OrthoFinder output from all 47 species
Ceric.1Z029900.1 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.135 EMB80, EMB1275,... Calpain-type cysteine protease ADL1 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Cre17.g728300 No alias Calpain-type cysteine protease DEK1 OS=Zea mays 0.01 OrthoFinder output from all 47 species
Dcu_g03220 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.03 OrthoFinder output from all 47 species
GSVIVT01025470001 EMB80, EMB1275,... Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
LOC_Os02g47970.1 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.02 OrthoFinder output from all 47 species
Mp2g12820.1 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.02 OrthoFinder output from all 47 species
Nbi_g02513 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.02 OrthoFinder output from all 47 species
Smo235391 EMB80, EMB1275,... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Smo236021 EMB80, EMB1275,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Solyc12g100360.1.1 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.03 OrthoFinder output from all 47 species
Spa_g04851 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.04 OrthoFinder output from all 47 species
Zm00001e001376_P002 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004358 glutamate N-acetyltransferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051879 Hsp90 protein binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022682 Calpain_domain_III 1998 2134
IPR001300 Peptidase_C2_calpain_cat 1688 1987
No external refs found!