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  5. Sam_g17728

Sam_g17728


Description : component *(MED19) of head module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0000348 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17728
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Ala_g05176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g44891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g40923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23216.t1 Aspi01Gene23216 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24173.t1 Aspi01Gene24173 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0104.g044779 No alias not classified & original description: CDS=37-1830 0.05 OrthoFinder output from all 47 species
Ceric.26G062200.1 Ceric.26G062200 not classified & original description: pacid=50599227... 0.02 OrthoFinder output from all 47 species
Dcu_g25484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012386 No alias not classified & original description: CDS=300-2663 0.02 OrthoFinder output from all 47 species
Spa_g21348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR010730 HET 3 37
No external refs found!