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  5. Sam_g17696

Sam_g17696


Description : substrate binding component *(TGD2) of TGD lipid importer complex & original description: none


Gene families : OG0002728 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002728_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17696

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00204440 TGD2,... Lipid metabolism.lipid transport.plastidial lipid... 0.04 OrthoFinder output from all 47 species
Adi_g077180 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Als_g57847 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.04 OrthoFinder output from all 47 species
Aspi01Gene67421.t1 TGD2, Aspi01Gene67421 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Cba_g78288 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.02 OrthoFinder output from all 47 species
Ceric.21G002500.1 TGD2, Ceric.21G002500 substrate binding component *(TGD2) of TGD lipid... 0.02 OrthoFinder output from all 47 species
Dac_g14252 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Dde_g02786 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.02 OrthoFinder output from all 47 species
Ehy_g31606 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.02 OrthoFinder output from all 47 species
Len_g03263 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
MA_103964g0010 TGD2 substrate binding component TGD2 of TGD lipid importer complex 0.03 OrthoFinder output from all 47 species
MA_10434063g0010 TGD2 substrate binding component TGD2 of TGD lipid importer complex 0.02 OrthoFinder output from all 47 species
Nbi_g02081 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Ore_g17022 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0234.g026505 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003399 Mce/MlaD 227 301
No external refs found!