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  5. Sam_g17594

Sam_g17594


Description : not classified & original description: none


Gene families : OG0000412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000412_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17594

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene44844.t1 ALMT9, AtALMT9,... anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68030.t1 ALMT9, AtALMT9,... anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010495 ATALMT12, ALMT12 anion channel *(QUAC/ALMT) & original description: CDS=385-1056 0.03 OrthoFinder output from all 47 species
Cba_g19876 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31608 No alias anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02816 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002502 No alias anion channel *(QUAC/ALMT) & original description: CDS=1-1533 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020499 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: CDS=456-2165 0.03 OrthoFinder output from all 47 species
Tin_g04053 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!