Sam_g17419


Description : not classified & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17419

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00158230 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.VETH... 0.03 OrthoFinder output from all 47 species
AMTR_s00204p00029410 evm_27.TU.AmTr_v1... Filament-like plant protein 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aev_g39769 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48635.t1 Aspi01Gene48635 microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62960.t1 Aspi01Gene62960 microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G007900.1 Ceric.27G007900 microtubule assembly factor *(TCS1) & original... 0.06 OrthoFinder output from all 47 species
Dac_g35011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13597 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Len_g21207 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c9_13770V3.1 Pp3c9_13770 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g59643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021772 No alias microtubule assembly factor *(TCS1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g28650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25653 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e038583_P001 Zm00001e038583 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA

No InterPro domains available for this sequence

No external refs found!