Sam_g17251

Description : translation elongation factor *(EF-G) & original description: none

Gene families : OG0002078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g17251

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00149p00031690	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.05	OrthoFinder output from all 47 species
AT1G62750	ATSCO1/CPEF-G,...	Translation elongation factor EFG/EF2 protein	0.04	OrthoFinder output from all 47 species
Adi_g024951	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.02	OrthoFinder output from all 47 species
Ala_g02375	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Als_g01087	No alias	translation elongation factor *(EF-G) & original...	0.02	OrthoFinder output from all 47 species
Als_g15104	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Als_g15105	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Aob_g05315	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Aop_g06164	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene30844.t1	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.02	OrthoFinder output from all 47 species
Cba_g01251	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Ceric.04G106300.1	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Ceric.30G070700.1	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.02	OrthoFinder output from all 47 species
Dac_g00996	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g08930	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Ehy_g01583	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.02	OrthoFinder output from all 47 species
Gb_36066	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.02	OrthoFinder output from all 47 species
LOC_Os04g45490.1	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.04	OrthoFinder output from all 47 species
Len_g12465	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Lfl_g02343	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Msp_g07900	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Nbi_g06861	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Ore_g06596	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002734	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Smo143627	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
Solyc08g079180.3.1	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.04	OrthoFinder output from all 47 species
Tin_g01189	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e007402_P001	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.05	OrthoFinder output from all 47 species
Zm00001e041325_P001	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004359	glutaminase activity	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042816	vitamin B6 metabolic process	IEP	HCCA
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	HCCA
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	HCCA
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0046184	aldehyde biosynthetic process	IEP	HCCA
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041095	EFG_II	486	559
IPR000640	EFG_V-like	683	769
IPR005517	Transl_elong_EFG/EF2_IV	561	679
IPR004161	EFTu-like_2	406	473
IPR000795	T_Tr_GTP-bd_dom	91	363

External Links

No external refs found!

Sam_g17251

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation