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  5. Sam_g17027

Sam_g17027


Description : not classified & original description: none


Gene families : OG0001667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001667_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17027

Target Alias Description ECC score Gene Family Method Actions
Adi_g025163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g56980.1 LOC_Os04g56980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g39310.1 LOC_Os08g39310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g01092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo176439 No alias No description available 0.02 OrthoFinder output from all 47 species
Zm00001e011981_P002 Zm00001e011981 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR014876 DEK_C 50 103
IPR003121 SWIB_MDM2_domain 217 288
No external refs found!