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  5. Sam_g17014

Sam_g17014


Description : E3 ubiquitin ligase *(PIR) & original description: none


Gene families : OG0001288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17014

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene31036.t1 Aspi01Gene31036 E3 ubiquitin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16712 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02224 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_1408g0010 No alias Putative E3 ubiquitin-protein ligase RF298... 0.01 OrthoFinder output from all 47 species
Msp_g26673 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005333 No alias E3 ubiquitin ligase *(PIR) & original description: CDS=227-3001 0.03 OrthoFinder output from all 47 species
Solyc01g080430.4.1 Solyc01g080430 Putative E3 ubiquitin-protein ligase RF298... 0.02 OrthoFinder output from all 47 species
Spa_g33498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14761 No alias E3 ubiquiTin ligase *(PIR) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!