Sam_g17005


Description : not classified & original description: none


Gene families : OG0000765 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17005

Target Alias Description ECC score Gene Family Method Actions
Adi_g076502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026330 No alias not classified & original description: CDS=24-1157 0.02 OrthoFinder output from all 47 species
Cba_g08895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G087700.1 Ceric.02G087700 not classified & original description: pacid=50584452... 0.07 OrthoFinder output from all 47 species
Ceric.14G018200.1 Ceric.14G018200 not classified & original description: pacid=50634515... 0.03 OrthoFinder output from all 47 species
Ceric.25G052900.1 Ceric.25G052900 not classified & original description: pacid=50593857... 0.03 OrthoFinder output from all 47 species
Ceric.31G033800.1 Ceric.31G033800 not classified & original description: pacid=50573729... 0.08 OrthoFinder output from all 47 species
Dac_g00772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105734 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g04299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04300 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g10066 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g14069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g42436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53605 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04483 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04560 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030896 checkpoint clamp complex IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 94 415
No external refs found!