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  5. Sam_g16954

Sam_g16954


Description : not classified & original description: none


Gene families : OG0000609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16954

Target Alias Description ECC score Gene Family Method Actions
AT3G01290 No alias SPFH/Band 7/PHB domain-containing membrane-associated... 0.02 OrthoFinder output from all 47 species
Als_g08318 ATHIR1, HIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G003300.1 Ceric.12G003300 not classified & original description: pacid=50600885... 0.02 OrthoFinder output from all 47 species
Dac_g14875 ATHIR1, HIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46313 ATHIR1, HIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03234 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os06g04460.1 LOC_Os06g04460 Hypersensitive-induced response protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os09g19710.1 ATHIR1, HIR1,... Hypersensitive-induced response protein-like protein 2... 0.02 OrthoFinder output from all 47 species
Msp_g01951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008981 ATHIR1, HIR1 not classified & original description: CDS=4-870 0.03 OrthoFinder output from all 47 species
Solyc06g071050.4.1 ATHIR1, HIR1,... Hypersensitive-induced reaction 1 protein OS=Capsicum... 0.03 OrthoFinder output from all 47 species
Spa_g24100 ATHIR1, HIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 10 181
No external refs found!