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  5. Sam_g16563

Sam_g16563


Description : E1 ubiquitin-activating enzyme & original description: none


Gene families : OG0000675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16563
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AT5G06460 ATUBA2, UBA 2 ubiquitin activating enzyme 2 0.02 OrthoFinder output from all 47 species
Adi_g001009 UBA1, MOS5, ATUBA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081325 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cre09.g386400 ATUBA2, UBA 2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os07g49230.1 UBA1, MOS5,... ubiquitin-activating E1 protein 0.02 OrthoFinder output from all 47 species
Sam_g34793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44854 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR018965 Ub-activating_enz_E1_C 958 1050
IPR032418 E1_FCCH 228 296
IPR019572 UBA_E1_SCCH 639 887
IPR032420 E1_4HB 297 366
IPR000594 ThiF_NAD_FAD-bd 55 445
IPR000594 ThiF_NAD_FAD-bd 452 951
No external refs found!