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  5. Sam_g16560

Sam_g16560


Description : EC_1.3 oxidoreductase acting on CH-CH group of donor & original description: none


Gene families : OG0001853 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001853_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16560

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g01390.1 ACX1, ATACX1,... acyl CoA oxidase (ACX). OPC-8:CoA oxidase 0.02 OrthoFinder output from all 47 species
Lfl_g38707 ACX1, ATACX1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Nbi_g07058 ACX1, ATACX1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR029320 Acyl-CoA_ox_N 14 129
IPR002655 Acyl-CoA_oxidase_C 478 653
IPR006091 Acyl-CoA_Oxase/DH_mid-dom 131 234
No external refs found!