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  5. Sam_g16468

Sam_g16468


Description : co-chaperone *(Hsp40) & original description: none


Gene families : OG0000480 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16468

Target Alias Description ECC score Gene Family Method Actions
Ala_g09188 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01491 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09480 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034612001 J2, ATJ2 DnaJ protein homolog OS=Cucumis sativus 0.02 OrthoFinder output from all 47 species
LOC_Os03g44620.2 ATJ3, ATJ, LOC_Os03g44620 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
Lfl_g06550 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33328 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20807 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40464 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g009770.3.1 ATJ3, ATJ, Solyc04g009770 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Solyc05g055160.3.1 J2, ATJ2, Solyc05g055160 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Solyc11g006460.3.1 J2, ATJ2, Solyc11g006460 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Spa_g43389 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005000_P002 J2, ATJ2, Zm00001e005000 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 14 72
IPR002939 DnaJ_C 126 347
IPR001305 HSP_DnaJ_Cys-rich_dom 152 218
No external refs found!