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  5. Sam_g16462

Sam_g16462


Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0000347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16462

Target Alias Description ECC score Gene Family Method Actions
AT1G08470 SSL3 strictosidine synthase-like 3 0.02 OrthoFinder output from all 47 species
AT3G57030 No alias Calcium-dependent phosphotriesterase superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g15853 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G059200.1 Ceric.15G059200 EC_4.3 carbon-nitrogen lyase & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g03770 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007473001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.02 OrthoFinder output from all 47 species
GSVIVT01033612001 SSL2 Protein STRICTOSIDINE SYNTHASE-LIKE 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os04g59300.1 SSL3, LOC_Os04g59300 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species
Ore_g32641 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10382 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g040090.4.1 Solyc04g040090 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g24412 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03220 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038523_P001 LAP3, Zm00001e038523 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 163 249
No external refs found!