Sam_g16450


Description : BBR/BPC-type transcription factor & original description: none


Gene families : OG0000626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16450
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Als_g04252 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03048 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0222.g058789 BPC3, ATBPC3 BBR/BPC-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.06G050900.1 ATBPC4, BPC4,... BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g28154 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02782 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007727 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g24432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 17 316
No external refs found!