Sam_g16435


Description : not classified & original description: none


Gene families : OG0003801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003801_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16435
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Adi_g109650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g40746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!