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  5. Sam_g16192

Sam_g16192


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16192

Target Alias Description ECC score Gene Family Method Actions
Als_g32072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
LOC_Os04g59510.1 LOC_Os04g59510 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g06765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.01 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e008083_P001 Zm00001e008083 component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 714 765
IPR019787 Znf_PHD-finger 785 826
IPR008395 Agenet-like_dom 20 114
No external refs found!