Sam_g16177

Description : component *(eEF1B-beta/-delta) of eEF1B eEF1A-GDP-recycling complex & original description: none

Gene families : OG0001031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g16177

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00211240	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1B...	0.05	OrthoFinder output from all 47 species
AT5G19510	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.11	OrthoFinder output from all 47 species
Adi_g095309	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Aob_g19175	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Aop_g00342	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.06	OrthoFinder output from all 47 species
Aop_g17687	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Aspi01Gene20667.t1	Aspi01Gene20667	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Azfi_s0050.g031167	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.1	OrthoFinder output from all 47 species
Ceric.23G080700.1	Ceric.23G080700	component *(eEF1B-beta/-delta) of eEF1B...	0.11	OrthoFinder output from all 47 species
Ceric.32G024000.1	Ceric.32G024000	component *(eEF1B-beta/-delta) of eEF1B...	0.1	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000093.158	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.01	OrthoFinder output from all 47 species
Dac_g00420	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Dac_g18134	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.05	OrthoFinder output from all 47 species
Dac_g26124	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Dde_g00337	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Ehy_g02379	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
GSVIVT01008526001	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.03	OrthoFinder output from all 47 species
GSVIVT01037374001	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.11	OrthoFinder output from all 47 species
Gb_07694	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.05	OrthoFinder output from all 47 species
LOC_Os03g29260.2	LOC_Os03g29260	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.03	OrthoFinder output from all 47 species
LOC_Os07g46750.1	LOC_Os07g46750	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.1	OrthoFinder output from all 47 species
Lfl_g24793	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
MA_102713g0020	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.09	OrthoFinder output from all 47 species
Mp8g01660.1	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.14	OrthoFinder output from all 47 species
Msp_g04383	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Msp_g10669	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.11	OrthoFinder output from all 47 species
Nbi_g06059	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Pir_g08117	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Pp3c12_14790V3.1	Pp3c12_14790	Glutathione S-transferase, C-terminal-like;Translation...	0.01	OrthoFinder output from all 47 species
Ppi_g14054	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000173	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005173	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Sam_g17349	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.1	OrthoFinder output from all 47 species
Sam_g23640	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Sam_g31515	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.07	OrthoFinder output from all 47 species
Sam_g49094	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Sam_g49095	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Smo94371	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.05	OrthoFinder output from all 47 species
Solyc01g098000.3.1	Solyc01g098000	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.09	OrthoFinder output from all 47 species
Solyc07g016150.4.1	Solyc07g016150	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.06	OrthoFinder output from all 47 species
Solyc11g072190.2.1	Solyc11g072190	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.11	OrthoFinder output from all 47 species
Spa_g07922	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.06	OrthoFinder output from all 47 species
Spa_g07923	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.07	OrthoFinder output from all 47 species
Spa_g12874	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.06	OrthoFinder output from all 47 species
Spa_g21700	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.1	OrthoFinder output from all 47 species
Spa_g51035	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.07	OrthoFinder output from all 47 species
Tin_g14955	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Tin_g21340	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.05	OrthoFinder output from all 47 species
Zm00001e035548_P001	Zm00001e035548	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.04	OrthoFinder output from all 47 species
Zm00001e035783_P001	Zm00001e035783	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014038	EF1B_bsu/dsu_GNE	139	226

External Links

No external refs found!

Sam_g16177

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation