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  5. Sam_g15976

Sam_g15976


Description : component *(Clp1) of Cleavage Factor II (CF-IIm) complex & original description: none


Gene families : OG0003520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15976

Target Alias Description ECC score Gene Family Method Actions
Cba_g12558 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Ceric.38G063700.1 CLPS3, Ceric.38G063700 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.04 OrthoFinder output from all 47 species
Dcu_g13963 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.03 OrthoFinder output from all 47 species
Lfl_g10185 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.03 OrthoFinder output from all 47 species
Mp6g10380.1 CLPS3 component Clp1 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
Msp_g12143 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.01 OrthoFinder output from all 47 species
Pir_g09435 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017406 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.03 OrthoFinder output from all 47 species
Tin_g01837 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0031124 mRNA 3'-end processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR032319 CLP1_P 132 320
IPR032324 Clp1_N 9 99
IPR010655 Clp1_C 325 436
No external refs found!