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  5. Sam_g15874

Sam_g15874


Description : not classified & original description: none


Gene families : OG0002432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15874

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00061930 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.atypical kinase... 0.02 OrthoFinder output from all 47 species
Aop_g69463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009278 No alias ABC1 atypical protein kinase & original description: CDS=147-1826 0.04 OrthoFinder output from all 47 species
Cba_g12096 No alias ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G078000.1 Ceric.23G078000 ABC1 atypical protein kinase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G039200.1 Ceric.27G039200 ABC1 atypical protein kinase & original description:... 0.03 OrthoFinder output from all 47 species
Ppi_g05180 No alias ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g110940.3.1 Solyc03g110940 protein kinase (ABC1) 0.04 OrthoFinder output from all 47 species
Solyc07g009150.3.1 Solyc07g009150 protein kinase (ABC1) 0.02 OrthoFinder output from all 47 species
Spa_g18553 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004147 ABC1_dom 12 206
No external refs found!