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  5. Sam_g15842

Sam_g15842


Description : not classified & original description: none


Gene families : OG0000459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15842

Target Alias Description ECC score Gene Family Method Actions
Adi_g057644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05126.t1 Aspi01Gene05126 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07936.t1 Aspi01Gene07936 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14541.t1 Aspi01Gene14541 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22163 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Ehy_g27671 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Gb_23885 No alias Dynein 8 kDa light chain, flagellar outer arm... 0.01 OrthoFinder output from all 47 species
Len_g23721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019354 No alias not classified & original description: CDS=419-1351 0.03 OrthoFinder output from all 47 species
Sam_g03224 No alias light chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Sam_g19304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007017 microtubule-based process IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0031023 microtubule organizing center organization IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 214 298
No external refs found!