Sam_g15730


Description : manganese/calcium cation transporter *(BICAT) & original description: none


Gene families : OG0000681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15730

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00088810 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.PAM71... 0.02 OrthoFinder output from all 47 species
AT1G64150 No alias Uncharacterized protein family (UPF0016) 0.06 OrthoFinder output from all 47 species
AT4G13590 No alias Uncharacterized protein family (UPF0016) 0.02 OrthoFinder output from all 47 species
Adi_g049937 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Adi_g078249 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Als_g15079 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Aob_g01813 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Aop_g30835 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G008500.1 Ceric.31G008500 manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Cre16.g660000 No alias Solute transport.carrier-mediated transport.PAM71... 0.01 OrthoFinder output from all 47 species
Dde_g31351 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g02423 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01019449001 No alias Solute transport.carrier-mediated transport.PAM71... 0.02 OrthoFinder output from all 47 species
GSVIVT01029035001 No alias Solute transport.carrier-mediated transport.PAM71... 0.03 OrthoFinder output from all 47 species
LOC_Os01g12220.1 LOC_Os01g12220 manganese/calcium cation transporter (BICAT) 0.04 OrthoFinder output from all 47 species
LOC_Os11g34180.1 LOC_Os11g34180 manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species
Len_g10003 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Mp5g10930.1 No alias manganese/calcium cation transporter (BICAT) 0.01 OrthoFinder output from all 47 species
Mp6g21360.1 No alias manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
Msp_g11243 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g00803 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13324 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Ore_g06932 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Ore_g15318 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Solyc08g081770.3.1 Solyc08g081770 manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
Solyc09g091240.4.1 Solyc09g091240 manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
Zm00001e008707_P003 Zm00001e008707 manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species
Zm00001e026075_P001 Zm00001e026075 manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001727 Gdt1 260 333
IPR001727 Gdt1 130 208
No external refs found!