Sam_g15628

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0002087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002087_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g15628
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00219480	HEME2,...	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder output from all 47 species
AMTR_s00075p00091010	HEME1,...	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder output from all 47 species
AT2G40490	HEME2	Uroporphyrinogen decarboxylase	0.07	OrthoFinder output from all 47 species
AT3G14930	HEME1	Uroporphyrinogen decarboxylase	0.03	OrthoFinder output from all 47 species
Ala_g13341	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g19735	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g61203	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene68757.t1	HEME2, Aspi01Gene68757	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0049.g030928	HEME1	EC_4.1 carbon-carbon lyase & original description: CDS=53-1354	0.04	OrthoFinder output from all 47 species
Ceric.16G044600.1	HEME2, Ceric.16G044600	EC_4.1 carbon-carbon lyase & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.27G010500.1	HEME1, Ceric.27G010500	EC_4.1 carbon-carbon lyase & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021319.48	HEME2	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder output from all 47 species
Cre02.g073700	HEME2	Coenzyme metabolism.tetrapyrrol...	0.07	OrthoFinder output from all 47 species
Cre02.g076300	HEME1	Coenzyme metabolism.tetrapyrrol...	0.06	OrthoFinder output from all 47 species
Cre11.g467700	HEME2	Coenzyme metabolism.tetrapyrrol...	0.05	OrthoFinder output from all 47 species
Dac_g08545	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g01104	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g01091	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g02496	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01014200001	HEME1	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder output from all 47 species
GSVIVT01032710001	HEME2	Coenzyme metabolism.tetrapyrrol...	0.05	OrthoFinder output from all 47 species
Gb_19378	HEME2	uroporphyrinogen III decarboxylase	0.02	OrthoFinder output from all 47 species
LOC_Os03g21900.1	HEME2, LOC_Os03g21900	uroporphyrinogen III decarboxylase	0.04	OrthoFinder output from all 47 species
Len_g09571	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g17519	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g02794	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g02865	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10435805g0010	HEME1	uroporphyrinogen III decarboxylase	0.02	OrthoFinder output from all 47 species
MA_10435949g0010	HEME2	uroporphyrinogen III decarboxylase	0.04	OrthoFinder output from all 47 species
Mp1g00080.1	HEME2	uroporphyrinogen III decarboxylase	0.07	OrthoFinder output from all 47 species
Mp2g07210.1	HEME2	uroporphyrinogen III decarboxylase	0.04	OrthoFinder output from all 47 species
Nbi_g04176	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g16765	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017290	HEME2	EC_4.1 carbon-carbon lyase & original description: CDS=109-1317	0.07	OrthoFinder output from all 47 species
Smo438672	HEME2	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder output from all 47 species
Solyc06g048730.3.1	HEME2, Solyc06g048730	uroporphyrinogen III decarboxylase	0.05	OrthoFinder output from all 47 species
Solyc10g007320.3.1	HEME1, Solyc10g007320	uroporphyrinogen III decarboxylase	0.05	OrthoFinder output from all 47 species
Spa_g06611	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g09313	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g00829	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e001594_P001	HEME2, Zm00001e001594	uroporphyrinogen III decarboxylase	0.08	OrthoFinder output from all 47 species
Zm00001e027899_P002	HEME1, Zm00001e027899	uroporphyrinogen III decarboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016744	transketolase or transaldolase activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000257	Uroporphyrinogen_deCOase	71	407

External Links

No external refs found!

Sam_g15628

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation