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  5. Sam_g15524

Sam_g15524


Description : not classified & original description: none


Gene families : OG0006318 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15524

Target Alias Description ECC score Gene Family Method Actions
Aop_g31844 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g02723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G041100.1 Ceric.21G041100 not classified & original description: pacid=50602652... 0.05 OrthoFinder output from all 47 species
Cre10.g441450 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g30786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014261 No alias not classified & original description: CDS=1-2157 0.04 OrthoFinder output from all 47 species
Zm00001e013253_P001 Zm00001e013253 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR024626 Kri1-like_C 520 604
IPR018034 Kri1 333 437
No external refs found!