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  5. Sam_g15417

Sam_g15417


Description : subgroup ERF-IV/DREB2 transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15417
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00095120 ERF110,... Ethylene-responsive transcription factor ERF110... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00034p00206140 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00095p00096190 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00148p00084540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 OrthoFinder output from all 47 species
AT1G53910 RAP2.12 related to AP2 12 0.03 OrthoFinder output from all 47 species
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.03 OrthoFinder output from all 47 species
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.02 OrthoFinder output from all 47 species
AT5G13330 Rap2.6L related to AP2 6l 0.02 OrthoFinder output from all 47 species
AT5G19790 RAP2.11 related to AP2 11 0.03 OrthoFinder output from all 47 species
Aev_g16587 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Aev_g31166 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g31370 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07025 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g21684 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07603.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15146.t1 Aspi01Gene15146 subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32075.t1 DREB26, Aspi01Gene32075 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene49723.t1 HRE2, Aspi01Gene49723 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49734.t1 HRE2, Aspi01Gene49734 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010458 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014119 ATERF8, ATERF-8, ERF8 not classified & original description: CDS=1-357 0.03 OrthoFinder output from all 47 species
Azfi_s0149.g053251 No alias subgroup ERF-V transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g07845 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Cba_g23893 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dac_g08898 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g28422 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g17722 RAP2.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26103 RAP2.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01884 DEAR2 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Ehy_g31739 No alias subgroup ERF-III transcription factor & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01015540001 WIN1, SHN1 Cell wall.cutin and suberin.biosynthesis... 0.02 OrthoFinder output from all 47 species
Gb_03645 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 OrthoFinder output from all 47 species
LOC_Os01g58420.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45450.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54160.2 RAP2.2, LOC_Os02g54160 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41760.1 ATERF12, ERF12,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49700.1 LOC_Os05g49700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Len_g02180 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Len_g54846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10274g0010 Rap2.6L transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_15496g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.02 OrthoFinder output from all 47 species
MA_40048g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05560 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00480 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g21637 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36821 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06505 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ore_g20838 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ore_g21499 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Ore_g33731 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28388 RAP2.4 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40777 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43460 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49340 DREB2B, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g05879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08048 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Pnu_g31928 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Ppi_g11128 HRE2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000070 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006108 No alias not classified & original description: CDS=1-567 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010831 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013429 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014837 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023147 No alias not classified & original description: CDS=1-1539 0.02 OrthoFinder output from all 47 species
Sam_g06091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc05g050790.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc05g050830.3.1 Solyc05g050830 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc09g091950.1.1 Solyc09g091950 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc10g050960.3.1 RRTF1, Solyc10g050960 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc11g042560.1.1 Solyc11g042560 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g08637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16486 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16502 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49731 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g52658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000611_P001 HRE1, Zm00001e000611 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species
Zm00001e041533_P001 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 91 140
No external refs found!