Sam_g15306

Description : subgroup ERF-IV/DREB2 transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g15306

Target	Alias	Description	ECC score	Gene Family Method
AT1G28360	ATERF12, ERF12	ERF domain protein 12	0.03	OrthoFinder output from all 47 species
Adi_g001941	ATERF4, RAP2.5,...	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g044380	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Adi_g056295	ERF110	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g072233	RAP2.6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g55712	ERF-6-6, ERF6, ATERF6	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05675.t1	Aspi01Gene05675	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene07603.t1	DEAR1, CEJ1,...	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene32074.t1	Aspi01Gene32074	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene48121.t1	Aspi01Gene48121	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49723.t1	HRE2, Aspi01Gene49723	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Aspi01Gene72133.t1	TINY2, Aspi01Gene72133	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dde_g22670	Rap2.6L	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_06407	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Msp_g08810	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c5_11150V3.1	Pp3c5_11150	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Sam_g18921	No alias	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Solyc12g038440.1.1	HRE2, Solyc12g038440	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Tin_g28929	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000125_P001	Zm00001e000125	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	63	113

External Links

No external refs found!

Sam_g15306

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation