Sam_g15257

Description : ATP-dependent metalloprotease *(FtsH4/11) & original description: none

Gene families : OG0001340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001340_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g15257
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00107p00109770	FTSH11,...	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Adi_g025495	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Ceric.12G016700.1	ftsh4, Ceric.12G016700	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Ceric.36G065900.1	FTSH11, Ceric.36G065900	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001600.9	ftsh4	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Ehy_g14643	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
LOC_Os01g39260.1	ftsh4, LOC_Os01g39260	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.03	OrthoFinder output from all 47 species
LOC_Os01g43150.1	FTSH11, LOC_Os01g43150	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.04	OrthoFinder output from all 47 species
Len_g03868	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Len_g14097	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g02301	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
MA_10186842g0010	FTSH11	ATP-dependent zinc metalloprotease FTSH 11,...	0.02	OrthoFinder output from all 47 species
MA_64524g0010	FTSH11	ATP-dependent zinc metalloprotease FTSH 11,...	0.02	OrthoFinder output from all 47 species
Nbi_g02399	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Pir_g02556	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021883	FTSH11	not classified & original description: CDS=219-2795	0.02	OrthoFinder output from all 47 species
Solyc03g007330.3.1	FTSH11, Solyc03g007330	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.03	OrthoFinder output from all 47 species
Zm00001e020443_P001	FTSH11, Zm00001e020443	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	Interproscan
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	258	387
IPR000642	Peptidase_M41	469	649
IPR041569	AAA_lid_3	410	453

External Links

No external refs found!

Sam_g15257

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation