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  5. Sam_g15215

Sam_g15215


Description : component *(uL5m) of large mitoribosomal-subunit proteome & original description: none


Gene families : OG0009865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009865_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00223510 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Brassica napus 0.03 OrthoFinder output from all 47 species
AMTR_s00127p00094990 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
AMTR_s00251p00014110 RPS14,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AMTR_s00363p00007720 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
AMTR_s00370p00007710 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum 0.04 OrthoFinder output from all 47 species
AT2G07725 No alias Ribosomal L5P family protein 0.04 OrthoFinder output from all 47 species
ATMG00210 RPL5 ribosomal protein L5 0.04 OrthoFinder output from all 47 species
Aev_g12839 No alias component *(uL5m) of large mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Gb_34381 No alias 60S ribosomal protein L5, mitochondrial OS=Oenothera... 0.06 OrthoFinder output from all 47 species
LOC_Os09g08890.1 LOC_Os09g08890 component mtRPL5 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Lfl_g08344 No alias component *(uL5m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Mp2g12110.1 No alias component mtRPL5 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Pir_g07842 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g049950.1.1 Solyc01g049950 60S ribosomal protein L5, mitochondrial OS=Solanum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!