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  5. Sam_g15190

Sam_g15190


Description : calcium sensor *(CML) & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00316p00014990 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML44 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g40722 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13801.t1 UNE14, Aspi01Gene13801 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G067000.1 Ceric.17G067000 not classified & original description: pacid=50618804... 0.03 OrthoFinder output from all 47 species
Dcu_g22617 CML43 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24054 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os04g41540.1 AGD11, LOC_Os04g41540 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os06g07560.1 UNE14, LOC_Os06g07560 Probable calcium-binding protein CML30 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g17959 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23777 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7799814g0010 CML41 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc05g050750.1.1 AGD11, Solyc05g050750 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e007722_P001 AGD11, Zm00001e007722 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 82 143
IPR002048 EF_hand_dom 181 245
No external refs found!