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  5. Sam_g15153

Sam_g15153


Description : not classified & original description: none


Gene families : OG0002005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15153

Target Alias Description ECC score Gene Family Method Actions
Aev_g03800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G031300.1 Ceric.03G031300 not classified & original description: pacid=50572886... 0.02 OrthoFinder output from all 47 species
Ceric.07G081200.1 Ceric.07G081200 not classified & original description: pacid=50628006... 0.04 OrthoFinder output from all 47 species
Dcu_g21478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g050110.3.1 Solyc05g050110 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 176 286
No external refs found!