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  5. Sam_g15104

Sam_g15104


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15104

Target Alias Description ECC score Gene Family Method Actions
AT1G68300 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g009412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20248 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os05g42230.1 LOC_Os05g42230 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g17856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 6 157
No external refs found!