Description : regulatory component *(CYCT) of CTDK-I polymerase-II kinase complex & original description: none
Gene families : OG0000467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000467_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g14943 | |
Cluster | HCCA: Cluster_181 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00059p00215360 | CYCT1;4,... | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
AT4G19600 | CYCT1;4 | Cyclin family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g080715 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Als_g06567 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g06975 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
Als_g11007 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Als_g12540 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Als_g15535 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g06020 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g02220 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g08325 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene67943.t1 | CYCT1;4, Aspi01Gene67943 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0003.g007924 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0005.g009178 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g15182 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
Cre10.g453050 | No alias | Cyclin-T1-4 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
Dac_g13189 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g31518 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g24859 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05545 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
MA_8507811g0010 | No alias | cyclin (CYCT) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g00720.1 | CYCT1;4 | cyclin (CYCT). regulatory component of CTDK-I... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g03584 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ore_g10656 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g01978 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g05031 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g58617 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g02214 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g078180.3.1 | Solyc10g078180 | cyclin (CYCT). regulatory component of CTDK-I... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22452 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g31355 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e033879_P003 | CYCT1;4, Zm00001e033879 | cyclin (CYCT). regulatory component of CTDK-I... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
MF | GO:0004834 | tryptophan synthase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006568 | tryptophan metabolic process | IEP | HCCA |
BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | HCCA |
BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
BP | GO:0009308 | amine metabolic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
BP | GO:0016311 | dephosphorylation | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016791 | phosphatase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006671 | Cyclin_N | 51 | 183 |
No external refs found! |