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  5. Sam_g14813

Sam_g14813


Description : delta-12/delta-15 fatty acid desaturase & original description: none


Gene families : OG0001987 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14813

Target Alias Description ECC score Gene Family Method Actions
Ala_g13689 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Lfl_g07016 FAD8 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Msp_g19334 FAD8 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Ore_g38317 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ppi_g56692 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR021863 FAS_N 82 137
IPR005804 FA_desaturase_dom 145 398
No external refs found!