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  5. Lfl_g26828

Lfl_g26828


Description : not classified & original description: none


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g26828
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT5G53720 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Ala_g18787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39475.t1 Aspi01Gene39475 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0442.g070359 No alias not classified & original description: CDS=461-1399 0.02 OrthoFinder output from all 47 species
Cba_g08935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037134001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Msp_g01579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07143 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 64 119
No external refs found!