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  5. Sam_g14555

Sam_g14555


Description : class-III histone methyltransferase *(Trx) & original description: none


Gene families : OG0000660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14555
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00081590 SDG25, ATXR7,... Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.06 OrthoFinder output from all 47 species
AT5G53430 SET29, SDG29, ATX5 SET domain group 29 0.04 OrthoFinder output from all 47 species
Aev_g20401 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Ala_g07772 SDG25, ATXR7 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Als_g16658 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Als_g30869 ATX3, SDG14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56618 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aob_g04447 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Aob_g23333 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Aop_g06246 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aop_g19017 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46554.t1 ATX4, SDG16,... class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Ceric.01G107400.1 ATX4, SDG16,... class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G012900.1 SDG25, ATXR7,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cre09.g395584 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre11.g475950 SDG25, ATXR7 Histone-lysine N-methyltransferase ATXR7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre12.g515050 ATX3, SDG14 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g39988 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g07171 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g09379 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g07137 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01027118001 ATX4, SDG16 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Gb_04139 SDG25, ATXR7 class III/Trithorax histone methyltransferase component... 0.04 OrthoFinder output from all 47 species
LOC_Os01g46700.1 ATX4, SDG16,... class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Len_g14720 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g10001 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
MA_10426105g0010 ATX4, SDG16 class III/Trithorax histone methyltransferase component... 0.02 OrthoFinder output from all 47 species
MA_10429134g0010 ATX3, SDG14 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_14080g0020 ATX3, SDG14 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_18041g0010 SDG25, ATXR7 class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Mp1g17790.1 SDG25, ATXR7 class III/Trithorax histone methyltransferase component... 0.07 OrthoFinder output from all 47 species
Mp4g21720.1 ATX4, SDG16 class III/Trithorax histone methyltransferase component... 0.02 OrthoFinder output from all 47 species
Msp_g13977 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Ore_g03423 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.01 OrthoFinder output from all 47 species
Ore_g05016 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Pir_g13633 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001119 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Sam_g14051 No alias class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Smo164635 ATX3, SDG14 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Solyc03g083410.3.1 ATX4, SDG16,... class III/Trithorax histone methyltransferase component... 0.04 OrthoFinder output from all 47 species
Spa_g47178 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Tin_g13148 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Tin_g13372 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e039307_P005 SDG25, ATXR7,... class III/Trithorax histone methyltransferase component... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1039 1143
No external refs found!