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  5. Sam_g14465

Sam_g14465


Description : not classified & original description: none


Gene families : OG0003862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14465
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Aop_g39280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G060400.1 Ceric.35G060400 not classified & original description: pacid=50581410... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.63 No alias SURP and G-patch domain-containing protein 1-like... 0.02 OrthoFinder output from all 47 species
GSVIVT01032056001 No alias SURP and G-patch domain-containing protein 1-like... 0.02 OrthoFinder output from all 47 species
Gb_28017 No alias SURP and G-patch domain-containing protein 1-like... 0.02 OrthoFinder output from all 47 species
LOC_Os09g10930.2 LOC_Os09g10930 SURP and G-patch domain-containing protein 1-like... 0.03 OrthoFinder output from all 47 species
Len_g23963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g08770.1 No alias SURP and G-patch domain-containing protein 1-like... 0.01 OrthoFinder output from all 47 species
Ore_g23522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001643 No alias not classified & original description: CDS=1-1257 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002374 No alias not classified & original description: CDS=235-1527 0.02 OrthoFinder output from all 47 species
Spa_g21476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000061 Surp 148 197
IPR000467 G_patch_dom 334 377
No external refs found!