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  5. Sam_g14408

Sam_g14408


Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14408

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00187160 evm_27.TU.AmTr_v1... Callose synthase 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g22041 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22763 GSL03, ATGSL3, ATGSL03 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06886 gsl12, ATGSL12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75509 ATGSL01, GSL01,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g78181 ATGSL01, GSL01,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020944.35 GSL04, atgsl4,... Cell wall.callose.callose synthase 0.01 OrthoFinder output from all 47 species
LOC_Os01g34930.1 GSL7, ATGSL07,... callose synthase 0.03 OrthoFinder output from all 47 species
Mp3g24830.1 GLS2, ATGSL02, CALS5 callose synthase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002329 ATGSL01, GSL01,... EC_2.4 glycosyltransferase & original description: CDS=1-1506 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018794 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: CDS=579-6110 0.02 OrthoFinder output from all 47 species
Smo427055 ATGSL10, gsl10, CALS9 Cell wall.callose.callose synthase 0.03 OrthoFinder output from all 47 species
Spa_g38082 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR039431 Vta1/CALS_N 40 186
IPR026899 FKS1-like_dom1 319 429
No external refs found!