Sam_g14133


Description : linker histone *(H1) & original description: none


Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14133
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Adi_g012252 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026220 No alias linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02276 No alias linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_11137g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g14390.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ppi_g59703 HIS1-3 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0256.g026829 HIS1-3 linker histone *(H1) & original description: CDS=85-921 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 30 96
No external refs found!