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  5. Sam_g13990

Sam_g13990


Description : methylation reader *(ECT) & original description: none


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13990

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00214020 ECT5,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00068p00196240 ECT8,... No description available 0.02 OrthoFinder output from all 47 species
Adi_g065972 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081654 ECT7 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20125 ECT8 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23518 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36173 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37155 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10945 ECT8 methylation reader *(ECT) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene57222.t2 ECT5, Aspi01Gene57222 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0213.g058278 ECT6 methylation reader *(ECT) & original description: CDS=1-2130 0.02 OrthoFinder output from all 47 species
Ceric.38G048900.1 ECT8, Ceric.38G048900 methylation reader *(ECT) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G056000.1 ECT8, Ceric.38G056000 methylation reader *(ECT) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g23395 ECT8 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20647 ECT8 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029460001 ECT5 No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g48790.1 ECT8, LOC_Os01g48790 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Len_g23805 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26570 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21015 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435373g0010 ECT8 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
MA_29812g0010 ECT7 methylation reader (ECT) 0.04 OrthoFinder output from all 47 species
Mp1g00140.1 ECT5 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Msp_g35611 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03142 ECT7 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10542 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10631 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19392 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012931 ECT6 methylation reader *(ECT) & original description: CDS=1-1896 0.04 OrthoFinder output from all 47 species
Zm00001e029124_P001 ECT7, Zm00001e029124 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Zm00001e040047_P001 ECT5, Zm00001e040047 methylation reader (ECT) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 572 713
No external refs found!