Sam_g13728

Description : AP2-type transcription factor *(WRI/AIL) & original description: none

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g13728

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00086450	ADAP,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00202p00017170	WRI1, ATWRI1,...	External stimuli response.biotic...	0.02	OrthoFinder output from all 47 species
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
Aev_g39456	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ala_g28572	BBM	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14197	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g20859	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aob_g22039	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g27594	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene21780.t1	BBM, Aspi01Gene21780	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Cba_g06694	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.26G003300.1	PLT2, Ceric.26G003300	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g47713	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dde_g19882	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g12197	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01023697001	ADAP	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
GSVIVT01025100001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
GSVIVT01033273001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Gb_11937	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os03g12950.1	DRG, CKC, CKC1,...	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.02	OrthoFinder output from all 47 species
LOC_Os04g42570.1	PLT1, LOC_Os04g42570	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os06g43220.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os07g03250.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os07g39110.2	LOC_Os07g39110	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_113625g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_196219g0010	AIL5, EMK, CHO1	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
MA_30905g0010	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
MA_86195g0010	PLT2	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Mp8g11450.1	No alias	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Msp_g28024	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ore_g41099	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Pir_g24109	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Sam_g36453	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Solyc11g010710.2.1	PLT3, AIL6,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Solyc11g072600.3.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Zm00001e006752_P001	AP2, FLO2, FL1,...	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Zm00001e011539_P001	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Zm00001e015104_P001	PLT2, Zm00001e015104	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Zm00001e018951_P001	PLT2, Zm00001e018951	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Zm00001e038652_P002	DRG, CKC, CKC1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015293	symporter activity	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	8	62
IPR001471	AP2/ERF_dom	105	157

External Links

No external refs found!

Sam_g13728

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation