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  5. Sam_g13612

Sam_g13612


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13612
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Aev_g38416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39457 BHLH101 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17268.t1 Aspi01Gene17268 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0194.g057168 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.09G089000.1 Ceric.09G089000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z015800.1 ZOU, RGE1, Ceric.1Z015800 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g05687 BHLH100 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_05233 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g02041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10834 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_92168g0010 ZOU, RGE1 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g48319 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12577 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06468 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005643 ZOU, RGE1 bHLH-type transcription factor & original description: CDS=1-1506 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011220 ZOU, RGE1 bHLH-type transcription factor & original description: CDS=1-1275 0.03 OrthoFinder output from all 47 species
Smo421249 LRL3 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Spa_g19633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g42092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g45468 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004512 inositol-3-phosphate synthase activity IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006021 inositol biosynthetic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 181 234
No external refs found!