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  5. Sam_g13606

Sam_g13606


Description : Globulin-type seed storage protein & original description: none


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13606

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene47416.t1 Aspi01Gene47416 Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011190 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0104.g044758 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z155300.1 Ceric.1Z155300 Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G021000.1 Ceric.23G021000 Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os02g14600.1 CRU1, CRA1,... Glutelin type-B 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os02g15070.1 CRU1, CRA1,... Glutelin type-B 2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Ore_g28500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001159 No alias Globulin-type seed storage protein & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 52 197
IPR006045 Cupin_1 230 375
No external refs found!