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  5. Sam_g13539

Sam_g13539


Description : not classified & original description: none


Gene families : OG0005184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13539
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00222810 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aop_g38359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18940.t1 Aspi01Gene18940 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029998 No alias not classified & original description: CDS=161-1216 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000692.72 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01022633001 No alias No description available 0.02 OrthoFinder output from all 47 species
Ore_g07301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo166751 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g23037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018962 DUF1995 76 161
No external refs found!